Uses of Class
org.jaga.individualRepresentation.proteinLocation.SubstitutionScoringMatrix

Packages that use SubstitutionScoringMatrix

org.jaga.individualRepresentation.proteinLocation
org.jaga.reproduction.proteinLocation

Uses of SubstitutionScoringMatrix in org.jaga.individualRepresentation.proteinLocation

Subclasses of SubstitutionScoringMatrix in org.jaga.individualRepresentation.proteinLocation

class

Blosum62 TODO: Complete these comments.

Uses of SubstitutionScoringMatrix in org.jaga.reproduction.proteinLocation

Fields in org.jaga.reproduction.proteinLocation declared as SubstitutionScoringMatrix

private SubstitutionScoringMatrix

PolypeptidePatternMutation.scoringMatrix

Methods in org.jaga.reproduction.proteinLocation that return SubstitutionScoringMatrix

SubstitutionScoringMatrix

PolypeptidePatternMutation.getScoringMatrix()

Methods in org.jaga.reproduction.proteinLocation with parameters of type SubstitutionScoringMatrix

void	PolypeptidePatternMutation.setScoringMatrix(SubstitutionScoringMatrix scoringMatrix)