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Class PolypeptidePatternItem

  extended by org.jaga.individualRepresentation.proteinLocation.PolypeptidePatternItem
Direct Known Subclasses:
AminoAcid, AminoAcidGroup, AminoAcidProperty, SingleGap

public abstract class PolypeptidePatternItem
extends java.lang.Object

TODO: Complete these comments.

Project: JAGA - Java API for Genetic Algorithms.

Company: University College London and JAGA.Org (http://www.jaga.org).

Copyright: (c) 2004 by G. Paperin.
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, ONLY if you include a note of the original author(s) in any redistributed/modified copy.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA or see http://www.gnu.org/licenses/gpl.html

JAGA public release 1.0 beta
Greg Paperin (greg@jaga.org)

Constructor Summary
protected PolypeptidePatternItem()
Method Summary
abstract  boolean doesntMatch(AminoAcid aminoAcid)
abstract  java.lang.String toString()
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail


protected PolypeptidePatternItem()
Method Detail


public abstract java.lang.String toString()
toString in class java.lang.Object


public abstract boolean doesntMatch(AminoAcid aminoAcid)

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