org.jaga.individualRepresentation.proteinLocation
Class PolypeptidePatternItem

java.lang.Object
  org.jaga.individualRepresentation.proteinLocation.PolypeptidePatternItem

Direct Known Subclasses:

AminoAcid, AminoAcidGroup, AminoAcidProperty, SingleGap

public abstract class PolypeptidePatternItem

extends java.lang.Object

TODO: Complete these comments.

Project: JAGA - Java API for Genetic Algorithms.

Company: University College London and JAGA.Org (http://www.jaga.org).

Copyright: (c) 2004 by G. Paperin.
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, ONLY if you include a note of the original author(s) in any redistributed/modified copy.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA or see http://www.gnu.org/licenses/gpl.html

Version:

JAGA public release 1.0 beta

Author:

Greg Paperin (greg@jaga.org)

Constructor Summary

protected

PolypeptidePatternItem()

Method Summary

abstract boolean	doesntMatch(AminoAcid aminoAcid)
abstract java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

PolypeptidePatternItem

protected PolypeptidePatternItem()

Method Detail

toString

public abstract java.lang.String toString()

Overrides:

toString in class java.lang.Object

doesntMatch

public abstract boolean doesntMatch(AminoAcid aminoAcid)