org.jaga.individualRepresentation.proteinLocation
Class AminoAcidPropertyFactory

java.lang.Object
  org.jaga.individualRepresentation.proteinLocation.AminoAcidPropertyFactory

public class AminoAcidPropertyFactory

extends java.lang.Object

TODO: Complete these comments.

Project: JAGA - Java API for Genetic Algorithms.

Company: University College London and JAGA.Org (http://www.jaga.org).

Copyright: (c) 2004 by G. Paperin.
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, ONLY if you include a note of the original author(s) in any redistributed/modified copy.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA or see http://www.gnu.org/licenses/gpl.html

Version:

JAGA public release 1.0 beta

Author:

Greg Paperin (greg@jaga.org)

Field Summary

static AminoAcidProperty	Aliphatic
static AminoAcidProperty	Aromatic
static AminoAcidProperty	Hydrophobic
static AminoAcidProperty	Negative
static AminoAcidProperty	Polar
static AminoAcidProperty	Positive
static AminoAcidProperty	Small
static AminoAcidProperty	Tiny

Constructor Summary

AminoAcidPropertyFactory()

Method Summary

static AminoAcidProperty	getPropertyByCode(int propertyCode)
static AminoAcidProperty	getPropertyByName(java.lang.String name)
static AminoAcidProperty	getRandomProperty(GAParameterSet params)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

Small

public static final AminoAcidProperty Small

Hydrophobic

public static final AminoAcidProperty Hydrophobic

Polar

public static final AminoAcidProperty Polar

Positive

public static final AminoAcidProperty Positive

Negative

public static final AminoAcidProperty Negative

Tiny

public static final AminoAcidProperty Tiny

Aliphatic

public static final AminoAcidProperty Aliphatic

Aromatic

public static final AminoAcidProperty Aromatic

Constructor Detail

AminoAcidPropertyFactory

public AminoAcidPropertyFactory()

Method Detail

getRandomProperty

public static AminoAcidProperty getRandomProperty(GAParameterSet params)

getPropertyByCode

public static AminoAcidProperty getPropertyByCode(int propertyCode)

getPropertyByName

public static AminoAcidProperty getPropertyByName(java.lang.String name)